Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939409.1_cds_XP_016484011.1_75066
CDS Infomation

[gene=LOC107804602] [db_xref=GeneID:107804602] [protein=threonine dehydratase biosynthetic, chloroplastic-like] [protein_id=XP_016484011.1] [location=join(17347..17790,19460..19639,19750..20226,21861..22109,22195..22268,22516..22633,22962..23096,23213..23353)] [gbkey=CDS]
Sequence

ATGGAGGTTCTTCATTTTACCGCTTTAAAGTCGTTGAATTCCTGCCTTCGTCCGGACTTA
ACGGCTAAAAGCTCCCCCATTGTTCCTACTAATGCCGTGAAAACGAGAAAAAGCAAAAGG
AACGCATTTATCCGTGCTAAGGCGGTGGAGATCTTGTCATCTCCAGTTACGGCAGCGGAG
CCGTTACAGGCATCACCGTCACAGGATTCACCTTCGGTTCCGTTGCTACGAGTTTCGCCG
AGCTCGTTGCAGTGCGAACCGGGATACTTAATACCGAATAGTCCGGTTTTAGGTACCGGT
GGTAAGATTGGTTACGAGTATTTGACAAATATCTTGTCGTCGAAAGTGTATGACGTGGCT
TATGAGACTCCTTTGCAGAACGCGCCTAAGCTGTCAGAGAGATTGGGAGTTAATGTGTGG
CTCAAAAGAGAGGATCTTCAGCCTGTCTTCTCGTTCAAGCTCAGAGGAGCTTACAATATG
ATGGCAAAACTTTCTAAGGAGCAGTTGGAAAGAGGGGTTATATGCTCATCAGCTGGAAAT
CATGCACAAGGTGTTGCATTAGCCGCTCAGAGACTTGGCTGCAATGCTGTGATTGCCATG
CCTGTTACTACACCAGACATTAAATGGAAATCAGTTAAGAGATTGGGTGCTACTGTTGTT
CTAGTGGGAGACGCATATGATGAAGCTCAAGCATACGCAAAAGCGCGGGCCGAAGCTGAA
GGCCGTACATTCATCCCTCCTTTTGATCACCCTGATGTCATCATAGGACAAGGTACAGTT
GGAATGGAGATAAATCGACAGCTTAAAGAAAACATTCATGCAGTCTTTGTGCCTGTTGGT
GGAGGGGGTCTTATAGCTGGTATTGCTGCCTATTTGAAAAGGGTTGCCCCTGATATAAAG
ATTATTGGAGTTGAGCCACTTGATGCAAATGCAATGGCATTATCATTACAGCATGGTCAA
AGAGTAATGCTGGACCAAGTTGGGGGTTTCGCAGATGGTGTAGCTGTTAAAGTGGTCGGT
GAAGAAACTTATCGTCTCTGCAAGGAATTAATAGATGGCGTGGTCCTTGTTGGTCGTGAT
GCTATATGTGCATCTATAAAGGACATGTTTGAAGAGAAAAGAAGCATACTAGAGCCTGCA
GGTGCACTTGCTCTTGCTGGAGCTGAGGCATACTGCAAGTACTATGGCCTCAAGGGTGAA
AACGTAGTAGCAATAACTAGTGGAGCCAACATGAACTTTGACAGACTTAGATTGGTAACT
GAACTCGCAGATGTTGGTAGACAACGGGAAGCTGTTCTTGCTACTTTTATGCCAGAAGAG
CCAGGTAGCTTCAAGAAGTTCTCTGAAATGGTAGGGCCAATGAATATCACTGAATTCAAG
TACAGATACAATTCTGGGAAAGAAAAAGCTCTTGTACTTTACAGTGTTGGTCTTCACACA
AAATTAGAACTTGAAGAAATGGTGAAGAGGATGAAATCTGCAGAACTGCAAACCGTTAAT
CTTACGGATAATGACTTGGTCAAAGATCATCTAAGGCATTTGATGGGTGGCAGAACAAAT
GTTCAAAATGAGCTTCTGTGTCGATTCACTTTTCCCGAGAAGCCCGGTGCTTTGATGAAG
TTTTTAAATGCTTTCAGCCCACGTTGGAATATAAGTTTGTTTCATTACCGTGCACAGGGA
GACACTGGTGCAAATGTGCTAGTTGGCATCCAAGTTCCGCAGGCTGAGGTCGATGAGTTC
CAGGGACGGGCTGACAGTCTTGGGTATGAATATGCAATGGAGAGTCTCAATGAGGCTTTC
CAGCTCATAATGCACTGA

Peptide Sequence

PEP ID

XP_016484011.1
PEP Infomation

PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Nicotiana tabacum]
Sequence

MEVLHFTALKSLNSCLRPDLTAKSSPIVPTNAVKTRKSKRNAFIRAKAVEILSSPVTAAE
PLQASPSQDSPSVPLLRVSPSSLQCEPGYLIPNSPVLGTGGKIGYEYLTNILSSKVYDVA
YETPLQNAPKLSERLGVNVWLKREDLQPVFSFKLRGAYNMMAKLSKEQLERGVICSSAGN
HAQGVALAAQRLGCNAVIAMPVTTPDIKWKSVKRLGATVVLVGDAYDEAQAYAKARAEAE
GRTFIPPFDHPDVIIGQGTVGMEINRQLKENIHAVFVPVGGGGLIAGIAAYLKRVAPDIK
IIGVEPLDANAMALSLQHGQRVMLDQVGGFADGVAVKVVGEETYRLCKELIDGVVLVGRD
AICASIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKGENVVAITSGANMNFDRLRLVT
ELADVGRQREAVLATFMPEEPGSFKKFSEMVGPMNITEFKYRYNSGKEKALVLYSVGLHT
KLELEEMVKRMKSAELQTVNLTDNDLVKDHLRHLMGGRTNVQNELLCRFTFPEKPGALMK
FLNAFSPRWNISLFHYRAQGDTGANVLVGIQVPQAEVDEFQGRADSLGYEYAMESLNEAF
QLIMH

Transcript Sequence

Gene sequence data has not been registered.